Interview with: John D. Prunty, C.P.A., CFO and V.P., Finance - featuring: their anti-infective products for treating diseases that currently have no satisfactory therapy.

Optimer Pharmaceuticals, Inc. (OPTR-NASDAQ)

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With Prulifloxacin, an antibiotic currently in a Phase 3 trial for the treatment of travelers’ diarrhea in hand, Optimer Pharmaceuticals bought back the North American rights to Difimicin also in Phase 3 trials, putting them on track for commercialization.

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Healthcare
Biotechnology
(OPTR-NASDAQ)


Optimer Pharmaceuticals, Inc.

10110 Sorrento Valley Road, Suite C
San Diego, CA 92121
Phone: 858-909-0736


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John D. Prunty, C.P.A.
CFO and V.P., Finance

Interview conducted by:
Lynn Fosse, Senior Editor
CEOCFOinterviews.com
Published - April 12, 2007

BIO:
John D. Prunty, C.P.A. has served as our Chief Financial Officer and Vice President Finance since June 2006. Before joining us, Mr. Prunty held several key positions with Maxim Pharmaceuticals, Inc., a biopharmaceutical company, for six years, including Chief Financial Officer, Vice President of Finance, and Corporate Secretary. Prior to his employment at Maxim, Mr. Prunty served as Senior Director of Finance and Corporate Controller at Gen Probe Incorporated, a manufacturer of nucleic acid tests that diagnose human diseases, from 1997 to 2000. He also held senior management positions at I Bus, currently known as I Bus/Phoenix, Inc., a division of Maxwell Laboratories, Inc., an electronic device company. Mr. Prunty began his career as an auditor at Ernst & Young LLP, an accounting firm, where he spent seven years in public accounting. He is a certified public accountant and received a B.B.A. from the University of San Diego and an M.S. in management from San Diego State University.

Company Profile:

Optimer Pharmaceuticals, Inc. was founded and registered as a Delaware Corporation in 1998. The Company headquarters and R&D laboratory are located in San Diego, California, less than ten minutes away from The Scripps Research Institute. Optimer also has one subsidiary, Optimer Biotechnology, Inc. located in Taipei, Taiwan. We have 39 employees, 17 of whom hold Ph.D., M.D. or DVM degrees.

Optimer is currently focused on discovering, developing, and commercializing innovative anti-infective products for treating diseases that currently have no satisfactory therapy. Our initial development efforts address products that treat gastrointestinal infections and related diseases where current therapies have limitations, including diminished efficacy, serious adverse side effects, drug-to-drug interactions, difficult patient compliance and bacterial resistance. We have two late-stage anti-infective product candidates, Difimicin and Prulifloxacin. Dificimin, our lead product candidate, is an antibiotic currently in a Phase 3 registration trial for the treatment of CDAD, the most common nosocomial diarrhea. Prulifloxacin is an antibiotic currently in Phase 3 trials for the treatment of travelers' diarrhea.

The Company has also licensed technologies and therapeutic targets from The Scripps Research Institute and The Memorial Sloan-Kettering Cancer Center. These licenses form the core of Optimer's carbohydrate technologies.

CEOCFO
: Mr. Prunty, you are with Optimer under a year; what attracted you to the company?
Mr. Prunty: “When I looked at biotechs in the San Diego community, I saw that Optimer was a biotech that had two product candidates that were either in or just about to enter Phase 3 clinical trials. It also had a great management team, scientific team, and a solid foundation with a carbohydrate based chemistry. Therefore, I thought that as a late-stage biotech it was a great opportunity.”

CEOCFO: What is the vision for the company and how is it playing out?
Mr. Prunty: “The vision for Optimer Pharmaceuticals currently is to be a biopharmaceutical company that discovers, develops and commercializes innovative anti-infective products. Our current products address the treatment of gastro-intestinal infections and related diseases. Other products in our pipeline that are not in that space, we want to develop to a stage where we can then opportunistically partner out. With our recent announcement of buying back or regaining the North American rights to our lead product candidate, Difimicin (OPT-80) from Par Pharmaceutical Companies, Inc. (NYSE: PRX), we now hold worldwide rights to Difimicin. Therefore, we are on track and the last phase of what we want to be as a company is commercialization. This gives us an opportunity to put a sales force in place in the United States and have two products in their hands, Difimicin and Prulifloxacin (OPT-99), which is an antibiotic currently in a Phase 3 trial for the treatment of travelers’ diarrhea.”

CEOCFO: Would you tell us about the lead product Difimicin and how it differs from what is available?
Mr. Prunty: “Difimicin is a differentiated antibiotic for the treatment of Clostridium difficile-associated diarrhea or CDAD, which is the primary cause of hospital infections and affects over 500,000 people a year in the US alone. One of the main causes of C-difficile-associated diarrhea or CDAD is broad spectrum antibiotic use. However, Difimicin is a narrow spectrum antibiotic, it only effects selected gram positive organisms like C-difficile, and has a limited disruption on the normal gut flora. When you take a broad spectrum antibiotic, it wipes out a lot of the good bacteria in your gut and allows C-difficile to flourish, but since Difimicin has limited disruption of that normal gut flora, we believe it will be a much more effective treatment for CDAD. It also is bacteriacidal against C-difficile, which means it literally kills the bacteria as opposed to just being bacteriaostatic like some of the other products in the C-difficile space. These bacteriaostatic products just stop the bacteria from proliferating, but do not kill it. Difimicin has other good product profile characteristics, such as having minimal systemic exposure; the drug stays in the gut, which for the treatment of C-difficile is where you want it. It does not get absorbed into the bloodstream so there are low side effects; it has a much more convenient dosing regimen, which will help with compliance as well as treatment. So far we have seen low resistance in in-vitro challenge where we tried to see if we could develop resistance to Difimicin and have not been successful in doing that.”

CEOCFO: Are doctors actively looking for a better drug in this area?
Mr. Prunty: “C-difficile is a significant concern. C-difficile is an infection where in 2002, was only infecting about 200 thousand people a year and now it is infecting well over 500 thousand people a year and our estimates are significantly higher than that in the US. If you Google CDAD, you would read articles about outbreaks all over the country. There is a hyper-virulent strain of the bacteria and that strain has been found in over 23 states; BI/NAP1 is the strain. As a result, last year C-difficile resulted in 6,700 deaths. It was the number-one hospital infection killer in the country. It is a significant growing problem and once it gets into a hospital, it is very difficult to eradicate; it is a spore-forming bacteria which is the way it protects itself.   It forms a spore which is a dormant state and it cannot be killed even by our drug. Once the antibiotic is removed, these spores flourish and come back to a bacterial state, causing problems again. Therefore, this is significant problem recognized as such and this NAP1 strain has moved the problem from long-term care facilities and hospitals into the community as well. It is estimated that over 25% of the C-difficile cases are now community acquired. C-difficile is a significant problem and doctors would be very happy for additional treatment. The only approved treatment now is oral Vancomycin and there are some issues with that in that it could result in Vancomycin-resisting enterococci (VRE) or bacteria that are resistant to Vancomycin, so doctors are reluctant to use that. Another drug that is used in most of the cases, off label is Metronidazole, but the efficacy of that has been dropping significantly with the new hyper-viral strain of NAP1.”

CEOCFO: Why the strategy to market on your own?
Mr. Prunty: “We are excited about the prospects for Difimicin. We think it can meet a significant unmet need. We have our other lead product candidate, Prulifloxacin, for which we have the US rights. Our plan is to put a sales force in place for Prulifloxacin. By regaining the rights to Difimicin in the US, it now allows us to put two products in the US sales force bag and leverage the asset or that capability. Both of these products are hospital-based products, which will not require an incredibly large sales force; this is going to be a very targeted, focused sales force. We think a sales force between 100 and 200 sales reps in the US would be sufficient to cover the high volume hospitals and long-term care facilities for these products.”

CEOCFO: Is your management team in-place for the commercialization of your products?
Mr. Prunty: “Yes the senior management is in place. When I came on board in June of 2006, my focus had been on moving the company from a private company to a public company. Coming on board in June, we moved straight through that with our initial public offering that we announced on February 9th (2007). Kevin P. Poulos joined us in July about a month after me, and Kevin is our Chief Commercial Officer. Kevin has an extensive background; he has worked at Wyeth Healthcare (Wyeth - NYSE: WYE), Pharmacia-Upjohn Pharmaceuticals, Rhone-Poulenc Rorer Pharmaceuticals Inc. (subsidiary of Rhone-Poulenc S.A. – NYSE: RP), GSK and he has been involved with some significant large antibiotics and anti-infective products where he spends most of his career. He has launched products like Zosyn®, Zyvox® and Synercid® and Kevin will be in charge of building our commercial team. However, we will not need to have that team in-place until mid 2008. We will see how the trials go and have the team in-place mid 2008, maybe a little later, have them placed 3 to 6 months prior to launch.”

CEOCFO: What are your thoughts on the enhanced role of CFO in a public entity?
Mr. Prunty: “I think the role of the CFO at the most minimum level is compliance. Therefore, the role would be meeting your 10K, 10Q requirements, interfacing and working with media relations group to work with investors. In addition, the CFO has to meet all the requirements of Sarbanes-Oxley and there are a lot of requirements other than 404. Obviously, SOX 404 has been kind of a monster and taken up a lot of time and financial resources, so that is at a minimum. What a good CFO does is incorporate finance as a service function in all areas of the company, whether that be manufacturing, commercialization or the research and development group. The CFO works with them to make sure they are working efficiently and effectively moving their areas forward to meet the objectives of the organization.”

CEOCFO: What is the financial picture of the company today?
Mr. Prunty: “I think if we look at the cash before the IPO, we had about $23 million that we reported as of September 30th of 2006. We closed the IPO four months later. We raised gross proceeds in the IPO of $49 million and that was net proceeds to the company of about $44 million after underwriter fees and expenses. Therefore, we ended the IPO with about $64 million and as part of the regaining the rights to Difimicin, we paid Par Pharmaceutical Companies, Inc. (NYSE: PRX) an upfront payment of $20 million, which would take us down to about $44 million in cash. What we said is that will be enough cash to last us into mid 2008.”

CEOCFO: What can we expect to happen in 2008?
Mr. Prunty: “At that point, there are many things that we could do to put a commercial infrastructure in place. We could do a subsequent offering, such as a follow on offering or another possibility would be the partnering of Difimicin rights and we continue to talk to potential partners. Our intent would be to at a minimum maintain co-marketing and co-promotion rights in the United States. We are looking at talking to people about partnering Difimicin in the rest of the world or providing worldwide rights as long as we maintain co-marketing and co-promotion in the US. In non-core markets like Japan, we definitely will partner Difimicin.”

CEOCFO: Why should investors be interested in Optimer Pharmaceuticals?
Mr. Prunty: “I think investors should be interested in Optimer Pharmaceuticals because it is a late-stage story, since we have two Phase 3 product candidates and that Difimicin meets a significant unmet medical need.”

CEOCFO: What doesn’t jump off the page about Optimer that people should realize?
Mr. Prunty: “Right now the focus, both internally and in terms of being interested in Optimer, is on Difimicin, which is the lead product candidate as well as Prulifloxacin. However, we do have a pipeline of other product candidates and underlying that pipeline is what we call our proprietary OPopS technology, which is a carbohydrate-based system that allows us to identify product candidates in an effective and efficient manner. I think the value of OPopS platform is not believe fully appreciated. However, as Difimicin and Prulifloxacin move through and complete their Phase 3 trials, and assuming success, we file NDAs (New Drug Application) for two products in 2008, the remainder of the pipeline will get more focus at that point as well as the OPopS technology. I think that capability is very impressive.”

CEOCFO: In closing, what would you like readers to remember about Optimer Pharmaceuticals?
Mr. Prunty: “I think the next 18 months will be very exciting. We have a tremendous amount of key milestones. We will be in four Phase 3 clinical trials in the next few months; two each for Difimicin and for Prulifloxacin. We expect to have data on three of those trials later this year in 2007. On the second Difimicin trial, we expect clinical results in the first half of 2008. We expect to file the Prulifloxacin NDA in the first half of 2008, and the Difimicin NDA in the second half of 2008. People should follow the story; we have some exciting news that will be coming out.”


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“The vision for Optimer Pharmaceuticals currently is to be a biopharmaceutical company that discovers, develops and commercializes innovative anti-infective products. Our current products address the treatment of gastro-intestinal infections and related diseases. Other products in our pipeline that are not in that space, we want to develop to a stage where we can then opportunistically partner out. With our recent announcement of buying back or regaining the North American rights to our lead product candidate, Difimicin (OPT-80) from Par Pharmaceutical Companies, Inc. (NYSE: PRX), we now hold worldwide rights to Difimicin. Therefore, we are on track and the last phase of what we want to be as a company is commercialization. This gives us an opportunity to put a sales force in place in the United States and have two products in their hands, Difimicin and Prulifloxacin (OPT-99), which is an antibiotic currently in a Phase 3 trial for the treatment of travelers’ diarrhea.” - John D. Prunty, C.P.A.

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